YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73950517
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRRSRRSKN FAGRGAVLIK ASSDCKNGRR GFRPHRKQSA RFLETGKSVE FVSIDWLKPE  60
   61 ASWTLIGSVV RGKEVLRSPA SPPDGSVADL FPEGIVTKMW FGGSESYGSS AFSGAGGYTQ 120
  121 SPGGFGSPTP SQAEKKSRAR AQHIVPCTIS QLLSATLVDE MFKIGNVEIS QVTIVGIIRH 180
  181 AEKAPTNIVY KIDDMTAAPM DVRQWVDTDD ASSENTVVPP ETYVKVAGHL RSFQNKKSLV 240
  241 AFKIMPLEDM NEFTAHILEV VNAHMILSKS NSQPPAGRAP ISNPGMGETG NFGGISSIPA 300
  301 NGLTVAQNQV LNLIKACPRP EGLNFQDLKN QLQHMSVASI KQAVDFLSNE GHIYSTVDDD 360
  361 HFKSTDAD

Type	Start	End	Confidence
Signal Peptide	1	23	0.55
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	368	0.99