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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76150605, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIVWLWVGF AMAASVVADR SKLPPACDSM IYCHGPLLNT VQMAGLYNDS KTFVDMKIKM  60
   61 SPNITLEHFY DMMSRTDSNP TKADIQEFVN QNFDPEGSEF EDWRPSDWKH NPGFLAKIKD 120
  121 PLLHKWASAL NDLWLDLGRK MKEAVKESPD LYSIIYVEHP FIVPGGRFRE FYYWDSYWII 180
  181 KGLLLSEMRT TAKGMVNNLL SIVDRYGFIP NGGRIYYLMR SQPPLLIPMV QLLMEDTDDL 240
  241 EYLREHIHTL DKEFDYWMTN HTIEVNHEGK KLKMAMYMDN SQGPRPESYK EDVDCARHFD 300
  301 TTEKKEELYA ELKAAAESGW DFSSRWFILN GTNKGNLTNL KVRSIIPVDL NAILCWNAQL 360
  361 MMEYHTRLQN EEKASYYRRI HDDFMEAIEE LLWHEDVGVW LDYSLESSRR RDYFYPSNLS 420
  421 PLWAGSYDKA RKDYFVNRVV NYLDKVKMDI FEGGIPTTFE HTGEQWDYPN AWPPLQYIVI 480
  481 MGLANTGHPE AMRYATELAT KWVRSNFEVW KQKAAMLEKY DATILGGLGG GGEYVVQTGF 540
  541 GWSNGVVMSL LNRYGDVISA ADNFGTAAES GAVYGAGVGA GGVVTALLVV LASLAAGTLG 600
  601 LMVYKRRKDY AGFCNGEVDK LISKKPYTEL KSLNGASNQK QR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle