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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73952371
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRQTISQAK KHPSLIPLFI FIGAGESGPS MGSKDCLYFC SSAYTTVPRL FPSKPRSVPE  60
   61 GRYCLIVPGF TPEQIFYNFD VFMTVLLIFA KEDSQSDGFW WACDRAGYRC NIARTPESAL 120
  121 ECFLDKHHEI IVIDHRQTQN FDAEAVCRSI RATNPSEHTV ILAVVSQASG DREETSVLPL 180
  181 LHAGFNRRFM ENSSIIACYN ELIQIEHGEV RSQFKLRACN SVFTALDHCH EAIEITSDDH 240
  241 VIQYVNPAFE RMMGYHKGEL LGKELAELPK SDKNRADLLD TINTCIKKGK EWQGVYYARR 300
  301 KSGDSIQQHV KITPVIGQGG KIRHFVSLKK LCCTTDNNKQ LHKVHRDSAD NSQTESHSFR 360
  361 YKNRRKESID VKSISSRGSD APSLQNRRYP SMARIHSMTI EAPITKVINI INAAQENSPV 420
  421 TVAEALDRVL EILRTTELYS PQLGTKDEDP HTSDLVGGLM TDGLRRLSGN EYVFTKNVHQ 480
  481 SHSHLAMPIT INDVPPCIAQ LLDNEESWEF NIFELEAVTH KRPLVYLGLK VFSRFGVCEF 540
  541 LHCSETTLRA WLQVIEANYH SSNAYHNSTH AADVLHATAF FLGKERVKGS LDQLDEVAAL 600
  601 IAATVHDVDH PGRTNSFLCN AGSELAVLYN DTAVLESHHT ALAFQLTVKD SKCNIFKNID 660
  661 RNHYRTLRQA IIDMVLATEM TKHFEHVNKF VNSINKPMAA EIEGSDCECN PTGKNFPENQ 720
  721 ILIKRMMIKC ADVANPCRPL DLCIEWAGRI SEEYFAQTDE EKRQGLPVVM PVFDRNTCSI 780
  781 PKSQISFIDY FITDMFDAWD AFAHLPALMQ HLADNYKHWK TLDDLKCKSL RLPSDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle