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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68446820, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRRYLEFVK PYKYRIIATI IIGIIKFGIP MLIPLLIKYA IDGVINNSAL STNEKFQHLS  60
   61 VAIGIALFIF LIVRPPIEYL RQYLAQWTSN KILYDIRKQL YNHLQALSAR FYANNQVGQV 120
  121 ISRVINDVEQ TKDFILTGLM NIWLDCITIV IALSIMFFLD VKLTFAAIFI FPFYILTVYF 180
  181 FFGRLRKLTR KRSQALAEVQ GFLHERVQGM SVIKSFAIED NEAKNFDHKN QHFLNRAFQH 240
  241 TSWNAYSFAA INTVTDLGPI IVIGFGAYLA INGSITVGTL AAFVGYLEQL FGPLRRLVSS 300
  301 FTTLTQSFAS MDRVFQLMDE DYDIKNGIGA QPIEIKQGHI ELKNVSFKYN EDESTILKDI 360
  361 NLNINKGDTV AFVGMSGGGK STLINLIPRF YDVSEGEILI DDYNVKDFLT GSLRNQIGLV 420
  421 QQDNILFSDT VRENILLGRP DATEEEVIEA AKMANAHEFI MNLHDGYDTE VGERGVKLSG 480
  481 GQKQRLSIAR IFLNNPPILI LDEATSALDL ESEAIIQEAL DVLSKDRTTL IVAHRLSTIT 540
  541 HADKIIVMQN GEIVETGTHK ELIEKQGAYE HLYSIQNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle