YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MNHG2_STAHJ
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQINEIIEL IAALLIFLGS IIAVISAIGI VKFQDVFLRS HASTKSSTLS VLLTLVGVLI  60
   61 YFTNEQSFFS VRLLLSIVFI NLTSPVGMHL VARAAYRTGA YMYRKDDAPS RSSILLSSKE 120
  121 YNSTEELKNR ARIREERREK IYYDVQKQRQ KEKQQEENIE SLSEARRETK D

Type	Start	End	Confidence
Non-Cytoplasmic	1	9	0.72
Transmembrane Helix	10	31	0.94
Cytoplasmic	32	41	0.73
Transmembrane Helix	42	63	0.84
Non-Cytoplasmic	64	70	0.71
Transmembrane Helix	71	92	0.85
Cytoplasmic	93	171	0.84