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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73957708
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCTYSSPRD EPTLRRTSSA KDSSFVEKMK KTGRNIIVFY GSQTGTAEEF ANRLSKDAHR  60
   61 YGMRGMAADP EEYDLADLGS LPEIENSLAV FCMATYGEGD PTDNAQDFYD WLQETDVDLS 120
  121 GVKYAVFGLG NKTYEHFNAM GKYVDKRLEQ LGAQRIFELG MGDDDGNLEE DFITWREQFW 180
  181 PAVCEHFGVE ATGEESSIRQ YELVVHTDID MAKVYVGEMG RLKSYENQKP PFDAKNPFLA 240
  241 AVTTNRKLNQ GTERHLMHLE LDISDSKLRY ESGDHVAVYP ANDSALVNQL GEILGADLDV 300
  301 VMSLNNLDEE SNKKHPFPCP TSYRTALTYY LDITNPPRTN VLYELAQYAS EPTEQEHLRK 360
  361 MASSSGEGKE LYLSWVVEAR RHILAILQDY PSLRPPIDHL CELLPRLQAR YYSIASSSKV 420
  421 HPNSVHICAV AVEYQTRSGR INKGVATSWL RAKEPAGENG RRALVPMFVR KSQFRLPFKA 480
  481 ATPVIMVGPG TGVAPFIGFI QERAWLRQQG KEVGETLLYY GCRRSDEDYL YREELAQFHQ 540
  541 DGSLTQLNVA FSREQPHKVY VQHLLKRDKE HLWQLIHEAG AHIYVCGDAR NMARDVQNTF 600
  601 YDIVAEVGAM EHAQAVDYIK KLMTKGRYSL DVWS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle