YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73959572
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLGRGLLGR RSLAALGAAC ALRGPGPALP GALLYHADSQ KSVTVEQGTM KVELLPALTD  60
   61 NYMYLIIDDE TKEAGVVDPV QPQKVVEAVK KHGVRLTTVL TTHHHWDHAG GNEKLVKLEP 120
  121 GLKVCGGDDR IGALTQKVTH LSTLQVGSLN VKCLSTPCHT SGHICYFVSK PNSSEPPAVF 180
  181 TGDTLFVAGC GKFYEGTADE MYRALLEVLG RLPPDTRVYC GHEYTINTFK FARHVEPSNA 240
  241 AVQEKLAWAK EKYSIGEPTV PSTIAEEFTY NPFMRVREKT VQQHAGETDP VTTMRAIRKE 300
  301 KDHFKVPRD

Type	Start	End	Confidence
Signal Peptide	1	30	0.98
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	309	0.99