YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73960413
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAEHLSAH ITPEWRKQYI QYEAFKDMLY SAQDQAPSVE VTDEDTVKRY FAKFEEKFFQ  60
   61 TCEKELAKIN TFYSEKLAEA QRRFATLQNE LQSSLDAQKE STGVTTLRQR RKPVFHLSHE 120
  121 ERVQHRNIKD LKLAFSEFYL SLILLQNYQN LNFTGFRKIL KKHDKILETS RGADWRVAHV 180
  181 EVAPFYTCKK INQLISETEA VVTNELEDGD RQKAMKRLRV PPLGAAQVTW TTFRVGLFCG 240
  241 IFIVLNITLV LAAVFKLETD RSIWPLIRIY RGGFLLIEFL FLLGINTYGW RQAGVNHVLI 300
  301 FELNPRSNLS HQHLFEIAGF LGILWCLSLL ACFFAPISVI PTYVYPLVLY GFMVFFLINP 360
  361 TKTFYYKSRF WLLKLLFRVF TAPFHKVGFA DFWLADQLNS LSVILMDLEY MICFYSFELK 420
  421 WDESGEPEIC HKYSYGVRAI VQCIPAWLRF IQCLRRYRDT KRAFPHLVNA GKYSTTFFTV 480
  481 TFAALYSTHK VKYSHSDTMV FFYLWIVFCI ISSCYTLIWD LKMDWGLFDK NAGENTFLRE 540
  541 EIVYPQKAYY YCAIIEDVIL RFAWTIQISS TSMTSLPHSG DIIATVFAPL EVFRRFVWNF 600
  601 FRLENEHLNN CGEFRAVRDI SVAPLNADDQ TLLEQMMDQD DGVRNRQKNR PWKYSQSISL 660
  661 RRPRLASQSK ARDTKVLIED TDDEANT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle