YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73960588
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSNGIGMIA AGKRRTCLLS LLLIGLWGCV VCPWSPGEDI CTAKPRDIPV NPMCIYRSPE  60
   61 KKAVEDEGAE QKIPEATNRR VWELSRANSR FATAFYQHVA DSKNDNDNIF LSPLSISTAF 120
  121 AMTKLGACNN TLKQLMEVFK FDTISEKTSD QVHFFFAKLN CRLYRKANKS SELVSANRLF 180
  181 GDKSLTFNET YQDISEAVYG AKLQPLDFKE NAEQSRMIIN KWVSNKTHGR ITDVVPPDAI 240
  241 DELTVLVLVN TIYFKGLWKS KFSPENTRKE LFYKAGGESC SVSMMYQEGK FRYRRVAEGT 300
  301 QVLELPFKGD DITMVLILPK PEKSLAKVEQ ELTPEVLQEW LDEMTETLLV VHMPCFRMED 360
  361 SFSVKERLQD MGLVDLFNPE KSRLPGEPRK DVLLQKAGND LFVSDAFHKA FLEVNEEGSE 420
  421 AAASTVIGIA GRSLNPNRVT FKANRPFLVL IREVALNTII FMGRVANPCD N

Type	Start	End	Confidence
Signal Peptide	1	37	0.88
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	471	0.99