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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73960632
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRGQEAAE KMSEASRGWG MRFKKRSQLP DTKFPDEAAS AHVEAAASYP PGPAKRLNDD  60
   61 RYSKQQIFNP FICKLHLGIF YFLVDSFCNK NDTRCLSNSC PNNSTCDDSS KDNNCHCSDA 120
  121 AIHVDKDCDN MRNPCFSNPC QGNATCVNNP GERSFLCKCP PGFSGTTCET AIVYCGINPC 180
  181 QHGGICHQDP VHPICVCPDG YFGRFCENDL DECASSPCHN GAMCQDGING YSCFCVPGYQ 240
  241 GRLCDLEVDE CVSDPCKNEA TCLNEIGRYT CICPRDYSGV NCEVEVDECQ SQPCRNGATC 300
  301 RDALEAYFCD CSPGFLGYDC ELNADECASQ PCLHGGLCVD GYNSYSCNCT GSGFTGTHCE 360
  361 TLMPLCWSEP CHNNATCEDS ADNYTCHCWP GYTGAQCETY INECNGNPCQ SGGTCIELSP 420
  421 EKPYGHLAQL PSSFSDPEAS GYVCICPPGL TGIHCEEDID ECSSNPCQNG GTCENLSGHY 480
  481 TCRCPFDNHS GTFYGGKNCS DVLLGCTRHQ CLNNGMCIPH FQNGQHGFSC LCPSGYTGPL 540
  541 CELVTTLSFE GNGFLWITSG PATGKGLVCN MALSFLTVQP MALLLFRGNR AMFIMLELRG 600
  601 GYIHLSIQVN NQSKVLLYIS HDTSDGAWHS VEVTFAEAVT LTLLDNTCKE KCITQAPSPF 660
  661 ESHRSICAFQ NSFLGGLPGG MTSYGIALLN IYNLPSTPSF VGCLQDVKID SNHITLEDIS 720
  721 SSSSLNVKAG CERKDWCERQ PCQNRGRCIN LWLNYQCDCY RPYEGPNCLR EYVAGRFGQD 780
  781 DSTGFAAFNL DKSYEENVTI SMFVRTHRPS GLLLALENKT YQYICVWLEH GRLAMLHPGS 840
  841 SKLVAKFVLS DGNVHLISLK IQPNKIELYQ SSQNLGFISA PTWKIQKGDV IYIGGLPERS 900
  901 QTEAKGGFFK GCIQDIRFNN QNLEFFPNSI SNASHNPTLV NVTQGCSGDN MCKSNPCHNG 960
  961 GVCYSLWDDF SCSCPANTAG KACEQVQWCE LSPCPPGAQC QAVPRGFECI ANAVFNAQSS1020
 1021 EILFRSNGNI TRELTNITLG FRTRDANVII LHAKKEPEFL NISIRDSRLL FQLQSGNSFY1080
 1081 MLSLTSLQSV NDGIWHQVTL SMTDPLAQAS RWQMEVDNQA PSVTSAVATG SLNFLKDNTD1140
 1141 IYVGDRAIDN SQGLKGCLST IEISGIYLSY FNVHGFTNKP QEEQFLKISM NSVVSGCLQL1200
 1201 NACNSSPCLH GGNCEDIYSS YHCSCPLGWS GTHCELNIDE CFSNPCIHGN CSDRVAAYRC1260
 1261 RCEPGYTGVN CETDIDNCQN HQCANGATCI SDPSGYSCHC SGNFTGKFCR HTRLSSTVCG1320
 1321 NEKTNLTCYN GGNCSEFQGE LKCLCRPGFT GERCDEAADE CASAPCAHGG LCRGLGRGFQ1380
 1381 CVCPAAFAGE RCEVHLADDL ISDVFTTIGS VTTVLLLILF LAVVASVVAS NKRATQGTYS1440
 1441 PSRQEKEGSR VEMWSMRPPP ALERLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle