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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73960689
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPAEIFPFV SKDLVFLIIS GVYEDDTVLS YSPCSFKKKQ KQEVLPAKPL ITITYLLDSP  60
   61 KPASYITLAG LIPFVVPPVV MVMTKTYIPL LAFTQKAYGA SLLSLLGGIR WGFALPEGSA 120
  121 AKPDFFKLAN STAPVVFSWF AFLISERLSE AIVTVIIGLG IALHIELLLL RHYPNWFKAL 180
  181 KIVVTLLPSP ASASQHKRAA LILRSLNSGH VDARVCLSAV PANVLLSFAV AFLHQYSNRQ 240
  241 CKFLPRYPFA KPKLQSDLSE FAIGTSWEYE CLPGYIKGSF SVTCLQSSKW SDVQQPCQRK 300
  301 SCRSPGELLH GSVLITTGVV FGSTITYSCD KGYRLIGDSS ATCIISDNTV TWDRDMPFCE 360
  361 SIPCEPPPAI SNGDFYSSSR EDFFYGMVVT YKCHAGQNGK KLFDLLGEKS IYCTSKDNRV 420
  421 GIWSGPPPQC IPLVKCPIPE VENGIIESGF GRSYSLNDTV IFRCKPGFTM KGSNIVWCQP 480
  481 NSKWDPPLPS CFKGCLLPPH VNHGSYNNLD KEFFTIGQEV SYSCDPGYTL LGTNTMQCTS 540
  541 LGTWSHTAPK CEAKSCDAIP NQLLNGHVVA PPNFQLGAEV SFVCDKGYRL NGQSSSQCVS 600
  601 EGMSVLWNNK FPVCEQIRCE PPPPIKNGWS GHSSDPVPLN TAVKYKCFNA FRLIGERLLF 660
  661 CISKDQVRGI WDKPPPTCEY YNRYSVCPEP TVPGGYRDKR SRPPYRHGDS VTFTCNTNFT 720
  721 MKGNKSVWCQ ANKTWGPTPL PTCESDFPLE CPPLPMIPNG YHTGEMVESF APGLSVTYSC 780
  781 EPGYLLVGEK TIRCLSSGKW NAVIPTCKEA QCEPPGPFLN GQIKGPPSLR VGATLNFDCN 840
  841 EGYRLQGQPS SRCVIAGQQA SWTKMPVCKE ILCPPPPSIL NGRHTGSPSG NVPYGSIVIY 900
  901 TCNPDPEEGV RFILMGEKTI YCTADSQKIG IWSAPAPRCE LSSSAVHCPP PQILRGQISW 960
  961 GQKEQYSYND TVVFACTFGF SLKGSKAIRC NAQGTWEPSV PVCEKECQAP PKILNGRKED1020
 1021 RHLVRFDPGT SIKYSCDPGY VLVGKESILC TSEGVWTPTV PECKVAECKP IGNQVFDKPQ1080
 1081 NGFIRPDVNS SCDEGYRLGG SVYQSCQGAI PWFMEIRLCE DITCPPPPVI YNGKHTGSSS1140
 1141 ENVPYGTMVT YTCNPGPESG VKFNLVGEST IHCTSNDQEM GTWSGPAPFC KLSLPTFQCP1200
 1201 PVYVANGYKI SGKEAPYFYN DSVAFKCNRG FTLKGSSKIR CKANNTWDPE IPVCEKDCQP1260
 1261 PFGLQHGRHT GGNRVLFVSG MTVDYTCDPG YLLVGNKSIH CMPSGTWSPS PPRCEAPCQP1320
 1321 VRDDFQELPI QSPVIPVNTS CQDGYRLTGH AYQKCQDAEN RVWFQKIPLC KVIHCEPPPM1380
 1381 IEHGRPRGVM AEHFLYGNEV SYECDQGFSL LGEKNIRCIS DPKGHGSWSK PLPQCLKPPP1440
 1441 VTHCPNPEVK HGYKLNKTHA SYAHNDTVYF ACNAGFIMNG SHVIQCHTNN KWMPGVPTCI1500
 1501 KKAFIGCQLP LKIPNGNHTG GDIARFSPGM SILYNCDQGY LLVGVALLLC THDGTWSQPA1560
 1561 PYCKEVNCSS PEYINGIQKG LEPGKMYQYG AVVTLECEEG YTLEGSPQSQ CQDDHGWNPP1620
 1621 LAVCKSPASL APLLSGLSAG SVLLIFLIGV TLCTILKHRE R

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