YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73961608
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRRGLARGD AARTTTHRRL REPRGLPDAD GGVGATWART AAERPRGQVI RRVGDGDRWG  60
   61 GLLMTKLAQW LWGLALLGST WAALTTGALG LELPSPCREV LWPLPAYLLV SAGCYALGTV 120
  121 GYRVATFHDC EDAARELQSQ IQEARADLAR RGMRF

Type	Start	End	Confidence
Cytoplasmic	1	67	0.94
Transmembrane Helix	68	91	0.87
Non-Cytoplasmic	92	103	0.82
Transmembrane Helix	104	125	0.81
Cytoplasmic	126	155	0.87