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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82947675, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLADTTNAR TGRNAALAVA RPGRLVLVVG GVFIALLLAV TAVTVYVQRQ QSIGEWRSNL  60
   61 SNLSRLLAEH ARQTINAADL VQKSIGDRVV ELGIETEDDL RRMLGSRATF EALRDKVSGV 120
  121 PQIDVATVVA TNGDVVNFTR SYPPPPINLA DRDYFKAHFA DPDLKFFLSL PAKNRGTGRW 180
  181 TFYLTRKIRN SHGATIGLVL TGIESAFLSE YYKAVNFSEF SAISLYRDDG GLLARMPERD 240
  241 DSMGKVLPQP GIQALRDGVE TFITSEPRLV DQSDRRFRIV APRAVAGYPL AVIVAATEEL 300
  301 VLADWRRKAL MLGAGSGGLS LLLLGLMVWI ARLLDNRETA MATARQAQQV AERANQAKAA 360
  361 FLATMSHEIR TPMNGVIGMT GLLLDTQLDP EQRHFATTIR DSAESLLTVI NDILDFSKLE 420
  421 AGKLDLESTD FELVGLVESI VDILAPRAHA KGIEIASMVD PDLPAWVRGD PGRLRQILMN 480
  481 LAGNAIKFTS HGGISIEVRD ETSPDGAGRL RFDVRDTGIG IPQDAIGRLF SMFMQVDAST 540
  541 ARRYGGTGLG LAISKRLTEM MGGTIGVEST PGAGSLFWFS LPFQMVETAP PQRPDLAGRR 600
  601 ILVVDDSPIN RDVLERQLRG FGVIVASCAD AESALAELGR AAATGTPWEA AIIDARMPGV 660
  661 TGSDLIGRIR AEPVLAPMGL IIASSQGLSP EDGSPKADAF IHKPLRRQTI LAVLARVLGL 720
  721 PHDPGLQDSP ESEPEAIPRP ARRLRILVAE DNPVNQQVAV GLLRKLGHSV DVAADGAEAV 780
  781 EAVRSRPYDL VLMDVQMPEM DGLQATAAIR ALTGGAERVP IVAMTANAMR GDDRMCLDAG 840
  841 MDRYISKPID RRKLMEVLAQ YAAEPPAAKP PQAENPAPSA VEIDVLDLLC EDLGVETVVE 900
  901 ILAKFFEDAT SREAECAAAL AREDHERVRR EAHAIKGAAA SLGLTDIRRT AEAMEAAVRS 960
  961 GAPIAAPLAA LSDAIVRLPA VLAGSAYALP RD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle