YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73966488
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGLWRPPWR PVAFCGWRWS HRGFAARAAE RVVPRLRPGT SGAGGAETAL RRLGTWRRPS  60
   61 PAPELALQPP PRRPKSTNPF TRAQEEDWRR RNKTVLTYVA AAAVGMLGAS YAAVPLYRLY 120
  121 CQTTGLGGSA VAGHASDQIE NMVPVKDRII KVTFNADVHA SLQWNFRPQQ TEIYVVPGET 180
  181 ALAFYKAKNP TDKPVIGIST YNVVPFEAGQ YFNKIQCFCF EEQRLNPQEE VDMPVFFYID 240
  241 PEFAEDPRMV NVDLITLSYT FFEAKEGQQL PVPGYH

Type	Start	End	Confidence
Cytoplasmic	1	94	0.82
Transmembrane Helix	95	114	0.81
Non-Cytoplasmic	115	276	0.96