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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73966748
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPDWRLCLE TRNSGSFSFP GSWSLLPKDD WQNENRGSSV HLGGRVYGDE RLGEEVWNEV  60
   61 GRNIPTGERM ENDIPLLSPV KGRLTERTSP APHSCLCVFS LRVVNTLLTR ELPLPGLPNK 120
  121 FRIKNGEVNS HSFSRPAHRG GPRGGAEGGG VENGPEVTYT SSGWPDPSGG CENPSAAACR 180
  181 ILRSGDAGVR AAPQELLIYE MAENGKNCDQ RRVAMNKEQY NGNFTDPSSM NEKKRRDREE 240
  241 RQNIVLWRQP LITLQYFSLE ILVILKDWTS KLWHRQSIVV SFLLLLAVLT ATYYTEGAHQ 300
  301 QYVQRIEKQF LLYAYWIGLG ILSSVGLGTG LHTFLLYLGP HIASVTLAAY ECNSVNFPEP 360
  361 PYPDQIICPD EDGIEGTISL WSIISKVRIE ACMWGIGTAI GELPPYFMAR AARLSGAEPD 420
  421 DEEYQEFEEM LEHAETAQDF ASRAKLAVQN LVQKVGFFGI LACASIPNPL FDLAGITCGH 480
  481 FLVPFWTFFG ATLIGKAIIK MHIQKIFVII TFSKHIVEQM VAFIGAVPGI GPSLQKPFQE 540
  541 YLEAQRQKLH HRREMGTQQG ENWLSWMFEK LVVVMVCYFI LSIINSMAQS YAKRMQQRLN 600
  601 SEEKTK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle