YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57091859
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVKKGGGGA GTGAEPASGA PGPSVEPKPE PQLQAESESG SESEPEAGPG PRPGPLQRKQ  60
   61 RIGPEDVLGL QRITGDYLCS PEENIYKIDF IRFKIRDMDS GTVLFEIKKP PASERLPINR 120
  121 RDLDPNAGRF VRYQFTPAFL RLRQVGATVE FTVGDKPVNN FRMIERHYFR NQLLKSFDFH 180
  181 FGFCIPSSKN TCEHIYDFPP LSEELINEMI RHPYETQSDS FYFVDDRLVM HNKADYSYSG 240
  241 TP

Type	Start	End	Confidence
Signal Peptide	1	19	0.54
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	242	0.99