YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238488122, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLRTAQPA QSFLRRAAVT APTVRSSLAA RSFASVQSDI FKPTKYGGKY TVTLIPGDGI  60
   61 GAEVAESVKT IFKADNVPIE WEQVDVSGVD AGNKHSEELF KESIASLRRN KLGLKGILFT 120
  121 PVERSGHQSF NVALRQELDI FASIVLIKNI PGYKTRHENV DLCIIRENTE GEYSGLEHQS 180
  181 VQGVVESLKI ITRAKSERIS KFAFGFALAN NRKKVTCIHK ANIMKLADGL FRSTFHKVAE 240
  241 NYPTLEVNDM IVDNASMQAV SRPQQFDVMV MPNLYGGILS NVGAALVGGP GVVPGCNMGR 300
  301 DVAVFEPGCR HVGLDIKGKD QANPSAMILS GSMLLRHLGL DDHANRISKA VYDVIGEGKT 360
  361 RTRDMGGQAT THEFTRAVLD KMEAAL

Type	Start	End	Confidence
Signal Peptide	1	29	0.93
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	386	0.98