YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83770784
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRFLFQPS FKAFTGSSHV QSPLAALSLI ASRTSIRAGS AETRERRRHD PFLMAQSRQR  60
   61 KAANLSRQQA LAEERESSLG DPVESAPTPF IQELKTVKSG PQAPSSSDAR LNYFVTPEGL 120
  121 QEAMEYSKAL TSPLENPDRD TADPQLEKEA SERHLQEHRN AQEAISRIVK ISNGNTQDQM 180
  181 RLHIQNCIET FGRHNTDKTL PPKPAAVSHQ SATEHPEKTP RVGQDTGSPE VQVAILTAKI 240
  241 LNLSRHLQTT NKDKHNKRNL RLLVHKRQKL LRYLRRKERG GPRWQHLIET LGLSDAAWKG 300
  301 EISM

Type	Start	End	Confidence
Signal Peptide	1	38	0.95
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	304	0.99