YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169764032
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METPKSELLE AVPLSSSLHD ALRYLHDHPY PHVPNPPACN KRASVALVLR VRPTHNHWPD  60
   61 SQHSSITPQE NNTASVKQRL NTFFSQDWVQ NGDPEALFIK RASRVGDRWT GHVALPGGKR 120
  121 DPEDADDKAA AIREASEEVG LDLTADEYIF VGNLPERVVS TGWTSVPSAA DGVDPSLMVL 180
  181 CPYVFLLTCS DSPTLRLQPT EVASTHWVPL SALLSPSQRT VEYVDISQRY AKTSGFITRL 240
  241 TYRYILGLME FSAVRLRPTE SLWCNPSFGF AAIDSRGPSP LMQRLKAWFF GNRPDPEDQT 300
  301 QPLLLWGLTL GILADFLDML PPHTAVQLWE YPTFTFPDLR LITSILTYRL RKSNKLQAKS 360
  361 RPQLSNTAVD SQTSGVSVTS NDDAAEASHF HNEVGIEGLG VGRDYESSET KELERDTHAI 420
  421 GIMLKGYYAK LRFAIQIFLA WRAAIGSLAV LYTWRLFRRR K

Type	Start	End	Confidence
Non-Cytoplasmic	1	437	0.92
Transmembrane Helix	438	457	0.89
Cytoplasmic	458	461	0.89