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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83771759
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPNERRHI VITMHLSKLF TLSTSLFYVV AASIDNDVSV LAKEAARANN QSLLWGPYKP  60
   61 NLYFGVRPRI PNSLSAGLMW AKVDDYATAQ SNFRHTCEQN EGMAGYGWDE YDIRKGGRQT 120
  121 IHDAGNSLDL TIDFIKVHGG QHGGSWAARV KGVPRDDALP DQPTTVVFYS ALEGLGNLGL 180
  181 HTKSDDSRGF EGDVKLAGYT SDLGEFTIDV TEGPRTNEYP EHEHPSYEDK PLDRTLVSSL 240
  241 TIPPEHAWQT KMILFSQMKE GVSETIEKYG AENPPPPSQV FTIKNTPGDG NVQLVQKVFK 300
  301 GAFECLSFEF LPWKLMLTIY VTADLLTQEI TSASAAFAER FDKILPPQSP FNSDKYSEFS 360
  361 KSMLSNLIGG IGYFHGTDIV DRSAAPEYDE ENEGFWEETA EARARAQPVL EGPKDLFTCV 420
  421 PSRPFFPRGF LWDEGFHLIP VVEWDTDLAL EIVKSWLSLM DEDGWIAREQ ILGAEARSKV 480
  481 PPEFTVQYPH YANPPTLFII LEAFLDKLDA NKNISVQQSP EDIAERLRSA YVQQPELGEA 540
  541 YIRSIYPLLK KHYSWYRNTQ RGDIKSYDRE AFSTKEAYRW RGRSVQHILT SGLDDYPRAQ 600
  601 PPHPGELHVD LISWMGMMTR SLRRIAERLG ETEDAEEFKY YETAIERNVD DLHWDEQAQT 660
  661 YCDATIDEYE ESVHVCHKGY ISIFPFLTGM VSSDSPRLKA ILDLISDPEE LWSDFGIRSL 720
  721 SKKDEFYGTA ENYWRSPVWI NINYLVFKNL YDIATTPGPH QEQAREMYSK LRKNVVENVF 780
  781 KEWKKTGFAW EQYNPETGKG QRTQHFTGWT SMVVKMMSMP DLPATESKGH DEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle