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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169778249
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYTPDAIV NRDEPVPVIS VGKQRDEARD SKPSAGHQRS TSGAGRSLQD KLFAKLLQQV  60
   61 IPAEDVNDDS VVVGDKRPID PKRPAFSLPL MANNFRRFNA RIGIVFSFQT RVERLLTWRK 120
  121 SSHTFSFLFV YSFVCLDPHL LVIIPIASIL LFVMVPAFLA RHPPPPSTST SSITPYYSYQ 180
  181 GPALAPAKTI KPAPETSKDF FRNMRDLQNC MADFSDIHDA TVSAFAPLTN FSNEKVSSVV 240
  241 FLVCTIITAL LFLTAHLLPW RYILLVGGNA AILSSHPSLQ ELFQNIAGDF TNEPARKAPI 300
  301 NPNNGKKNTM DVLGVSLPSS PSATMSSLRS LADISLDTYP EEREVEIFEI QYRSLAPYSD 360
  361 SQWDHFIFSP MPYDPLSPLR IAGDRPKGCR FFEDVQPPSG WAWKSKKWEL DLDCREWVVE 420
  421 RMITGVGFEV SESVSEESMA NDEIGGWVWD LPSVTSYRDS SGVNAALGYE EFDSDLKSSV 480
  481 RGEIKKVKRK GKGRASQDYE EKGGTGPSVM GEWRRRRWVR IVHRTSMPTE SDKGYTASED 540
  541 RD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle