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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73968217
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.55
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLVLESSLT VAPARGVRGN CSAWLSVLAW CSVGGRQRVC GMQDAAPGEP AGRCLAPEVQ  60
   61 FFVSSARWRL ALANGSRGEA RRGRAPRHVR QRREALLPPL RLLQPPPPQL PERALRPPEQ 120
  121 LPRRSRSRMV RGARQPQQPR SRLAPRLTGT VEKPPRKRKS RTEFALKEIM SSGGAEDDIP 180
  181 QGERKTVTDF CYLLDKSKQL FNGLRDLPQY GQKQWQSYFG RTFDVYTKLW KFQQQHRQVL 240
  241 DNRYGLKRWQ IGEIASKIGQ LYYHYYLRTS ETSYLNEAFS FYSAIRQRSY YSQVNKEDRP 300
  301 ELVVKKLRYY ARFIVVCLLL NKMDVVKDLV KELSDEIEDY THRFNTEDQV EWNLVLQEVA 360
  361 AFIEADPVMV LNDDNTIVIT SNRLAETGAP LLEQGMIVGQ LSLADALIIG NCNNQVKFSE 420
  421 LTVDMFRMLQ ALEREPMNLA SQMNKPGMQE SADKPTRREN PHKYLLYKPT FSQLYTFLAA 480
  481 SFKELPANSV LLIYLSATGV FPTGRSDSEG PYDFGGVLTN SNRDIINGDA IHKRNQSHKE 540
  541 MHCLHPGDLY PFTRKPLFII VDSSNSVAYK NFTNLFGQPL VCLLSPTAYP KALQDQSQRG 600
  601 SLFTLFLNNP LMAFLFVSGL SSMRRGLWEK CQEYLRKINR DIAQLLTHSR SIDQAFLQFF 660
  661 GDEFLRLLLT RFIFCSATMR MHKIFRETRN YPESYPQLPR DETVENPHLQ KHILELASIL 720
  721 DVRNVFLEST IDDY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle