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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83765302
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNPSLFRPA TAGLSTALYL GSLLQLSPAS GLSFTPVAQP DLELSPLGRV ALTGDFDAVS  60
   61 FYSYKEQSET ASVNNGSQSI LTPLPDGILT TLSTSDAYIR SMCPFTQKDG TYAGIFVGGN 120
  121 FTSLGGVETQ GAALFDPETK KVTALPGLSG SVSAVLCDKD TNSVYVGGDF KYENTSNAVA 180
  181 WVGNEGWKSL VFGGFNGPVT SILKSDDHII FGGSFDGIGN STSSKKNQQI INLQNATISS 240
  241 DAVSSRSGYS DPRNIICQTS GEDGEGKTWL LEDNSPGFWR ADMRFGYNPT KIRIYNTHFE 300
  301 GRGTKTFLLR RLPDNGIMNL TYTDPDTAKD VYCDQDCSLS NSTDEKYREF EFVNSVGMKG 360
  361 FQLEVHSWYG DGAGLNGIQL VQNDIFAYAI NDFNEPTCAD LKYPSKATQT GSWTTTELGQ 420
  421 SQSDYLTANI NDSTASDTSV VFEPDVKQSG NYSVVVYTPG CTQDGTCGSR GVVNVTATLK 480
  481 SNSKSAEPIQ MTIHQTNLND KYDTLYTGHV DSSDGSFRPS VTLTPVAGQG DVTIVASRVK 540
  541 FALIRASEGL DGELNGLYDF DPSAKTTSSN FTESAVNRAG LQLDEDATIR SLAIHDGVMY 600
  601 AGGNFSSSGF KNILSLKGET NATGLQQGGL NSEVSSMTVL DDILYVGGNF TDTSDRSNSD 660
  661 LKHVAAYSFG SKAWTALGGG VNGPVHKVTS LTLNVSTEIN ETTIGVTGDF DQLLAFDDNT 720
  721 LVNVTGFAIW VPSKKNWLQN LNVTQMAFAG QLSACTKVDN TTVIAGTLSS AGIAAAGAAA 780
  781 LLHEGPLSIK PLFANANFTG ETYTGIYETK SNRNLTIVGG HFTTTGTDGS SVKNLALLDG 840
  841 KAGTVKGLGT DIDNNSTFLA LTAWKDKLYA GGNVSGTFED YILNGFVVYD LENGTIARKQ 900
  901 PPRFTGDAAT VNSIAARPDS DEIYFGGQFE KAGALPCPGV CFWDAADQQW NRPGILSGKV 960
  961 LALKWISNKK LLAIGNLTVD GNSSAIATYT PKQQTWESWT SASDLPGTVT AFTPASVDVS1020
 1021 TFWLAGVSKN GSSYLANYDG SKFQYPGDLF DQGTTIRNLE VLSLTKDHSG VDVLHNDQVL1080
 1081 LVTGQLVIPD FGNASAALFN GTELTPFMLS SNADGQPGSM AQLFYENDNP YSSEVGNHHS1140
 1141 NGIVVLISFC CALGAVFLIV IAGVIFNKIQ RRRQGYMPGP QAYGTDRSSS MRRLPPEYLF1200
 1201 STLKSLNPGT PAI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle