YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83766041
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDYTYDEQ GQFFPFFILT LTGLVTFPLT YNLLKPSKEL ENTAPRIKSD YKPEHGDLIE  60
   61 AQKRKRLRKE RRIKRIVTVV LGYAVMAWMV YLIIVTARTV PKIWDPYDIL GISRSADEKA 120
  121 ISRHYKRLSL IYHPDKIRPD PAKNETIEML NERFVELTKA YKALTDEEVR NNYIQYGHPD 180
  181 GKQSFSIGIA LPQFIVTEGN GKYVLLVYGG LLGVLLPYIV GRWWYGSQRY TKERVLVASA 240
  241 GNIFREYKDG ITGGGIVGAL SSGDEFKDML KGSQAEAGLA KLEKMVLADD SSFLSSADRE 300
  301 KLKELDDSTR RKALALLWAY LGRIDLNDAT LNGEKYEAAP IALSLNEAFT AISLAFGNLR 360
  361 PILGSFQVSQ NIIQAIAPGS SPLLQLPYFT DDIVKSVEGD DAKTHFNVQR FMSLPEDKRH 420
  421 SLTVGAGLLS EKQYASAISV AKQLPALEVS KAFFKVMGEK VITPSSLVQL VVKARFVPPG 480
  481 YSNVPEVTPA DLEDVDPDED DLDALMGRKS TKTKKLANGE KVESKVEAIQ PPLAHAPYLA 540
  541 RDHSPRWHIF LADPKQGKMA VPPFTFTTFD KPLFDEAGKP TFNVQTLKMQ FQAPPQVGDF 600
  601 TFVMHLLCDS YLGLDTKMEV TLHIDDPAKA AALEEEDDIS EPDEDSIAGQ MQALKTGQPP 660
  661 KKKAKKPEDD SSEDESDTDG DAGDTSDTNT ETDVDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle