YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83775378
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEMQNSNP TILNAADLPK RLRPAPSRKP GIFGNGLFAS ALPFVYASKL PPEGFTSSSE  60
   61 SESDDDDLLE EPIDEQEIYD LVSTISDPEH PISLGALAVV SLPDISITPT LPYVPASPLR 120
  121 TVTVLITPTI THCSLATVIG LGVRVRLEQS LPPRFRVDVR IKEGTHSTAD EVNKQLADKE 180
  181 RVAAALENGT LMGVIAKMLE TCQ

Type	Start	End	Confidence
Cytoplasmic	1	30	0.82
Transmembrane Helix	31	48	0.75
Non-Cytoplasmic	49	203	0.68