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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73968711
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMELPVRST VGMKLRIMEG SSASRSLQFP GLSRPEEDGG EEAEDGGPEA EEPRWAGRPV  60
   61 NGSRLLSYGC REDYSDSEED GDGGAAPGRP VSKDDPGSRH RPRRSHGKPL CAPPAKPAGR 120
  121 PDTSVQGGGG SAMNDRAAAA GSLDRSRNVG EGGGADALDA SPAPRYRVHA KRPAPLLPPP 180
  181 LPDADPTLDS SSGSLLKTNN HIGGGALSAA DSARMFCNSL PPGASAAAPG ALRINHSNHT 240
  241 GSNHTYLKNA YNKPKLSEPE EELLQQFKRE EVSPTGGFSA HYLSMFLLTA ACLFFLILGL 300
  301 TYLGMRGTGV SEDGGLSIKK PFDETFGKIQ ESKKNLMMNT LYKLHDRLAQ LAGDHECGSS 360
  361 SQRTLSVQEA AAYLKDLGPE YEDIFNISLK WILENGKDVG IRCVGYGPEE QLTNITDVQF 420
  421 LQSTRPQMSF WCRFRRAFIT VTHRLLLLCL GVVMVCVVLR YMKYRWTKEE EETRQMYDMV 480
  481 VKIIDVLRSH NEACQENKDL QPYMPIPHVQ DSLIQPHDKK KMKKVWDRAV DFLAANESRV 540
  541 RTETRRIGGA DFLVWRWIQP SASCDKILVI PSKVWQGQAF HLDRRNSPPN SLTPCLKIRN 600
  601 MFDPVMEIGD QWHLAIQEAI LEKCSDNDGI VHIAVDKNSR EGCVYVKCLS PEYAGKAFKA 660
  661 LHGSWFDGKL VTVKYLRLDR YHHRFPQALT CNTPLKPSNK HMNSMSHLRL RTGLANSQGG 720
  721 S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle