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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73968823
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAHQAVAF QFTVTPDGVD FRLSREALKH IYLSGINSWK KRLIRIKNGI LRGVYPGSPT  60
   61 SWLVIVMATV GSSYCKVDIS MGLVCCIQRC LPEGCGPYRT PQTRALLSMA IFSTGVWMMG 120
  121 IFFFRQTLKL LLSYHGWMFE MHGQTSHFTK VWAICVRLLS SRRPMLYSFQ TSLPKLPVPS 180
  181 VPATVQRYLE SVRPLLDDEE YYRMEVLAKE FQDKTAPRLQ KYLVLKSWWA TNYVSDWWEE 240
  241 YVYLRSRAPL VVNSNYYVMD FVLIKNTNIQ AARLGNVVHA MIMYRRKLDR EEIKPVMALG 300
  301 IVPMCSYQME RMFNTTRIPG KETDLLQHLS DSRHVAVYHK GRFFKLWLYE GSQLLKPCDL 360
  361 ELQFQRILDD PSPPQPGEEK LAALTAGGRL EWAQARQAFF SSGKNKAALD AIERAAFFVA 420
  421 LDEESHHYDP EDEASLSLYG KALLHGNCYN RWFDKSFTVI AFKNGQLGLN TEHAWADAPI 480
  481 IGHLWEFVLG TETFHLGYTE TGHCQGKANP ALAAPQRLQW DIPEQCRAVI ESSCQVATAL 540
  541 ADDVELYCFQ FLPFGKGLIK KCRTSPDAFV QIALQLAHFR DRGKFCLTYE ASMTRMFREG 600
  601 RTETVRSCTS ESTAFVQAMA EGSRMKADLR DLFRKASKKH QNMYRLAMTG AGIDRHLFCL 660
  661 YVVSKYLGVS SPFLAEVLSE PWRLSTSQIA QFQIRMFDPD KYPKHLGAGG GFGPVADDGY 720
  721 GVSYMIAGEN TIFFHISSKF SSSETNAQRF GNHIRQALLD IADLFQGPKA DS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle