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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73971626
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAATRLLAG ILLALLTLTT EGGVLKKVIR HKRESGVNVT LSEEHQPVVF NHVYNIKLPV  60
   61 GSQCSVDLES ASGEKELAPP SEPSESFQEH TVDGENQIVF THRINIPRRA CGCAAAPDVK 120
  121 ELLSRLEELE NLVSSLREQC TTGAGCCLQP AEGRLDTRPL CSGRGNFSTE GCGCVCEPGW 180
  181 KGPNCSEPEC PGNCHLRGQC LDGQCVCDEG FTGEDCSQLA CPSDCNDQGK CVSGVCVCFE 240
  241 GYTGADCGDE VCPVPCNEEH GRCVEGRCVC QDGFAGEDCS EPLCLNSCHN RGRCVENECV 300
  301 CDEGFTGEDC SELICPNDCF DRGRCVNGTC YCEQGFSGED CGQLSCPNAC TGRGRCEQGQ 360
  361 CVCEPGFAGP DCSDRSCPND CHHRGRCVHG RCECDAGFGG PDCGQLQCPR GCSGHGHCVN 420
  421 GQCVCDEGHT GEDCGQLRCP NDCHSRGRCV QGQCVCEPGF QGYDCSDMSC PNDCHQHGRC 480
  481 VNGMCVCDDG YTGEDCRDLR CPRDCSDRGR CVAGRCECEH GFTGPDCADL ACPADCHGQG 540
  541 RCVNGQCVCH EGFTGATCQE RRCPGDCQGR GRCEDGRCTC QEGFTGPDCG QRSCPNGCSG 600
  601 WGQCVEGRCV CSEGHAGEDC SQVSPPKDLI VTEVTEETVN LAWDNEMRVT EYLVTYTPTH 660
  661 EDGLEMQFRV PGDQTSTTIR ELEPGVEYFI RVFAILENKK SIPVSARVAT YLPAPEGLKF 720
  721 KSIKETSVEV EWDPLDIAFE TWEIIFRNMN KEDEGEITKS LRRPETTYRQ TGLAPGQEYE 780
  781 ISLHIVKNNT RGPGLKRVTT TRLDAPSQIE VKDVTDTTAL ITWFKPLAEI DGIELSYGIK 840
  841 DVPGDRTTID LTHDENQYSI GSLKPDTEYE VSLISRRGDM SSNPAKETFT TGLDAPRNLR 900
  901 RVSQTDNSIT LEWRNGKAAV DSYRIKYAPI SGGDHAEVEV PRSPQATTKT TLTGLRPGTE 960
  961 YGIGVSAVKA DKESDPATIN AATDLDAPKD LRVSETTDTH LTLLWRKPSA KFDHYRLNYS1020
 1021 LPSGQPVEVK LPRDTTSYDL RGLEPGKGYS ILLTAEKGRH KSKPARLNAS TDHAPELENL1080
 1081 TVTEAGWDGL RLNWTAADQA YEHFVIQVQE ADTMEAPQNL TVPGSLRAVE VPGLKAATPY1140
 1141 RVTIYGVIRG YRTPVLSAEA STGETPNLGE VMVSEVGWNA LKLNWTAPEG AYEQFFIQVQ1200
 1201 ETDSVEAAQN LTVPGGLRSV DLPGLKAATH YSVTIRGLTR DFSTTPLSVE VLTEEVPDLG1260
 1261 NLTVPEVRWD GLTLDWTAPD GFYEQFVIEI QEADQAKEAH SLTVPGNLRS VEFPGLRPGT1320
 1321 PYTITLHGEV GGHSTRPLVV EAITEELPQL GDLAVTEAGW DGLRLNWTAA DPAYEHFVIQ1380
 1381 VQEANLVEAP QNLTVPGSLR AVEVPGLKAA TPYRVTIYGV IRGYRTPVLS AEASTATGPE1440
 1441 VGNLTVSDIT PESFNLSWTA TDGAFETFTI EIVDSNRFLE TMEYNVSGTE RTAHISGLHP1500
 1501 NNHFVIYLSG LAPSIRTKII SATATTEALP LLENLTISDI NPYGFTVSWM ASENAFDSFL1560
 1561 VTVVDSGKLL DPQEFTLSGT QRKLELRGLI TGIGYEVMVS GFSQGHQTKP LRAEIVTEAE1620
 1621 PEVDNLLVSD ATPDGFRLSW TADEGVFDSF VLKIRDTKKQ SEPLEITLLA PERTRDITGL1680
 1681 REATEYEIEL YGISSGRRSQ PVSAIATTAM GSPKEISFSD ITEDSATVSW MAPSAQVESF1740
 1741 RITYVPIAGG TSSVVNVDGT KTQTRLMKLL PGAEYLVSVI AMKGFEESEP VSGSFTTALD1800
 1801 GPSGLVTANV TDTEALAMWQ PAIAPVDSYV ISYTGERVPE ITRTVSGNTV EYALTDLEPA1860
 1861 TEYTLRIFAE KGPQKSSIIT TKFTTDLDSP RDLTATEVQS ETALLTWRPP RASVTGYLLV1920
 1921 YESVDGTVKE VILGPETTSY NLAELSPSTH YTAKIQALNG PLRSKLVQTS FTTIGLLYPF1980
 1981 PRDCSQAMLN GDTTSGLYTI YLNGDKAQAL EVYCDMTSDG GGWIVFLRRK NGREDFYRNW2040
 2041 KAYAAGFGDR REEFWLGLDN LHKITAQGQY ELRVDLRDHG KTAYAVYDRF SVGDAKTRYK2100
 2101 LKVEGYSGTA GDSMAYHNGR SFSTFDKDTD SAITNCALSY KGAFWYKNCH RVNLMGRYGD2160
 2161 NNHSQGVNWF HWKGHEYSIQ FAEMKLRPSN FRNLEGRRKR A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle