YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73973975
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSTMKYLHL RKSKILYIFL FVAYTVQTPE ISSSTAATKV YSKALAICHG PLDHYDFLIK  60
   61 AHELKDDKHQ RRVIQCLQKL HEDLKGYSID AGGLFSKLFS RSKPPRGLYV YGDVGTGKTM 120
  121 VMDMFYDYVE MKRKKRVHFH GFMLDVHERI HRLKKSLPKR KPGFMAKSYD PIAPIAEEIS 180
  181 EEACLLCFDE FQVTDIADAM ILKQLFENLF KNGVVVVATS NRPPEDLYKN GLQRANFVPF 240
  241 IAVLKKYCNT VQLDSGIDYR KRDLPAAGKL YYLTSEADVE AVMDKLFDEL AQKQNDLTRP 300
  301 RILKVQGREL RLNKACGTVA DCTFEELCER PLGASDYLEL SKNFDTVFLR NIPQFTLAKR 360
  361 TQARRFITLI DNFYDFKVRV ICSASTPIAS LFLHQHHDSE LEHSRILMDD LGLSQDSAEG 420
  421 LSMFTGEEEI FAFQRTLSRL TEMQTEQYWN EGDRSKK

Type	Start	End	Confidence
Signal Peptide	1	36	0.86
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	457	0.99