YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73976757
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAARAV SVGSGLRGLP RTLPLVVILG ATGTGKSTLA LQLGQRLGGE IVSADSMQVY  60
   61 EGLDIITNKV TAQEQRMCQH HMISFVDPLV TNYTVVDFRN KATALIEDIF ARDKIPIVVG 120
  121 GTNYYIESLL WKVLVNTKPQ EMGTEKVIDR KVELEKEDGH ALHKRLSQVD PEMAAKLHPH 180
  181 DKRKVARSLQ VFEETGISHS EFLHRQHAEE GGGPLGGPLK FPNLCILWLH ADQTVLDERL 240
  241 DKRVDDMLAA GLLDELRDFH RRYNQKKVAE NSQDYQHGIF QSIGFKEFHE YLVTEGKCTP 300
  301 ETSNQLLKKG IESLKQVTKR YARKQNRWVK NRFLSRPGPR VPPVYGLEVS DVSKWEECVL 360
  361 EPALEIVQSF IQGHQPAAAP VKMPCNETEN RRSHHMCDLC DRIIIGDREW AAHIKSKSHL 420
  421 HRLKKRRRLD SDAVTTIESP SISSDHEKEL KEKGSLGQNE KELESSV

Type	Start	End	Confidence
Signal Peptide	1	40	0.67
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	467	0.99