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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73979175
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSWKCLLFW AVLVTATLCT ARPAPTLPEQ DALPSSEDDD DDDDSSSEEK ETDNTKPNRM  60
   61 PVAPYWTSPE KMEKKLHAVP AAKTVKFKCP SSGTPNPTLR WLKNGKEFKP DHRIGGYKVR 120
  121 YATWSIIMDS VVPSDKGNYT CIVENEYGSI NHTYQLDVVE RSPHRPILQA GLPANKTVAL 180
  181 GSNVEFMCKV YSDPQPHIQW LKHIEVNGSK IGPDNLPYVQ ILKTAGVNTT DKEMEVLHLR 240
  241 NVSFEDAGEY TCLAGNSIGL SHHSAWLTVL EALEERPAAM TSPLYLEIII YCTGAFLISC 300
  301 MVGSVIIYKM KSGTKKSDFH SQMAVHKLAK SIPLRRQVSA DSSASMNSGV LLVRPSRLSS 360
  361 SGTPMLAGVS EYELPEDPRW ELPRDRLVLG KPLGEGCFGQ VVLAEAIGLD KDKPNRVTKV 420
  421 AVKMLKSDAT EKDLSDLISE MEMMKMIGKH KNIINLLGAC TQDGPLYVIV EYASKGNLRE 480
  481 YLQARRPPGL EYCYNPSHNP EEQLSSKDLV SCAYQVARGM EYLASKKCIH RDLAARNVLV 540
  541 TEDNVMKIAD FGLARDIHHI DYYKKTTNGR LPVKWMAPEA LFDRIYTHQS DVWSFGVLLW 600
  601 EIFTLGGSPY PGVPVEELFK LLKEGHRMDK PSNCTNELYM MMRDCWHAVP SQRPTFKQLV 660
  661 EDLDRIVALT SNQEYLDLSV PLDQYSPSFP DTRSSTCSSG EDSVFSHEPL PEEPCLPRHP 720
  721 AQLANGGLKR R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle