YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57097807
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGIKALISL SFGGAIGLMF LMLGCALPIY NQYWPLFVLF FYILSPIPYC IARRLVDDTD  60
   61 AMSNACKELA IFLTTGIVVS AFGLPIVFAR AHLIEWGACA LVLTGNTVIF ATILGFFLVF 120
  121 GSNDDFSWQQ W

Type	Start	End	Confidence
Cytoplasmic	1	6	0.94
Transmembrane Helix	7	30	0.89
Non-Cytoplasmic	31	35	0.70
Transmembrane Helix	36	56	0.67
Cytoplasmic	57	68	0.70
Transmembrane Helix	69	89	0.94
Non-Cytoplasmic	90	97	0.52
Transmembrane Helix	98	121	0.91
Cytoplasmic	122	131	0.70