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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73979700
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLISQSVI NYVEEENIPA LKALLEKCKD VDERNECGQT PLMIAAEQGN LEIVKELIKN  60
   61 GANCNLEDLD NWTALISASK EGHVHIVEEL LKCGVNLEHR DMGGWTALMW ACYKGRTEVV 120
  121 ELLLSHGANP SVTGLQYSVY PIIWAAGRGH ADIVHLLLQN GAKVNCSDKY GTTPLVWAAR 180
  181 KGHLECVKHL LAMGADVDQE GANSMTALIV AVKGGYTQSV KEILKRNPNV NLTDKDGNTA 240
  241 LMIASKEGHT EIVQDLLDAG TYVNIPDRSG DTVLIGAVRG GHVEIVRALL QKYADIDIRG 300
  301 QDNKTALYWA VEKGNATMVR DILQCNPDTE ICTKDGETPL IKATKMRNIE VVELLLDKGA 360
  361 KVSAVDKKGD TPLHIAIRGR SRKLAELLLR NPKDGRLLYR PNKAGETPYN IDCSHQKSIL 420
  421 TQIFGARHLS PTETDGDMLG YDLYSSALAD ILSEPTMQPP ICVGLYAQWG SGKSFLLKKL 480
  481 EDEMKTFAGQ QIEPLFQFSW LIVFLTLLLC GGLGLLFAFT VDLNLGIAVS LSFLALLYIF 540
  541 FIVIYFGGRR EGESWNWAWV LSTRLARHIG YLELLLKLMF VNPPELPEQT TKALPVRFLF 600
  601 TDYNRLSSVG GETSMAEMIA TLSDACEREF GFLATRLFRV FKTEDTQGKK KWKKTCCLPS 660
  661 FVIFLFIFGC IIAGITLLAI FRVDPKHLTV NAVLISIASI VGLAFVLNCR TWWQVLDSLL 720
  721 NSQRKRLHNA ASKLHKLKSE GFMKVLKCEV ELMARMAKTI DSFTQNQTRL VVIIDGLDAC 780
  781 EQDKVLQMLD TVRVLFSKGP FIAIFASDPH IIIKAINQNL NSVLRDSNIN GHDYMRNIVH 840
  841 LPVFLNSRGL SNARKFLVTS TTNGDIPCTD TTGIQEDADR RVSQNSLGEM TKLGSKTALN 900
  901 RRDTYRRRQM QRTITRQMSF DLTKLLVTED WFSDISPQTM RRLLNIVSVT GRLLRANQIS 960
  961 FNWDRLASWI NLTEQWPYRT SWLILYLEET EGIPDQMTLK TIYERISKNI PTTKDVEPLL1020
 1021 EIDGDIRNFE VFLSSRTPVL VARDVKTFLP CTVNLDPKLR EIIADVRAAR DQINIGGLAY1080
 1081 PPLPLHEAPP RPPSGYSQPP SVCSSSTSFN GPFGGGVVSP QPHSSYYSGM TGPQHPFYNR1140
 1141 GSGPASGAMI SLNSMNVDAV CEKLKQIEGL DQSMLPQYCA TIKKANINGR VLAQCNIDEL1200
 1201 KKEMSMNFGD WHLFRSTVLE MRNAENQVVP EDPRLLNENS SGPVPHGESA RRSSHNELPH1260
 1261 TELSSQTPYT LNFSFEELNT LGLDEGAPRH SHLSWQSQTR RTPSLSSLNS QDSSIEISKL1320
 1321 TDKVQAEYRD AYREYIAQMS QLEGGTGSTT ISGRSSPHST YYMGQSSSGG SIHSNLEPEK1380
 1381 GKDNEPKQDD GRKSFLMKRG DVIDYSSSGV STNDASPLDP ITEEDEKSDQ SGSKLLPGKK1440
 1441 SSERSSLFQT DLKLKGSGLR YQKLPSDEDE SGTEESDNTP LLKDDKDKKV EGKVERVSKS1500
 1501 PEHSAEPIRT FIKAKEYLSD ALLDKKDSSD SGVRSSESSP NHSLHNEGAD DSQLEKANLI1560
 1561 ELEDDSHSGK RGIPHSLSGL QDPIIARMSI CSEDKKSPSE CSLIASSPEE NWPACQKAYN1620
 1621 LNRTPSTVTL NNNSAPANRS NQNFDDMEGM RETSQVILRP GSSSNPTAIQ NENLKSMTHK1680
 1681 RSQRSSYTRL SKDSSELHAV ASSDSTGFGE ERESIL

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