YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73982258
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLAPLIAL VYSVPRLSRW LARPYYLLSA LLSVAFLLVR KLPPLCSSLP TQREDGNPCD  60
   61 FDWREVEILM FLSAIVMMKN RRSITVEQHI GNIFMFSKVA NAILFFRLDI RMGLLYITLC 120
  121 IVFLMTCKPP LYMGPEYIKY FNDKTIDEEL ERDKRVTWIV EFFANWSNDC QSFAPIYADL 180
  181 SLKYNCTGLN FGKVDVGRYT DVSVRYKVST SPLTKQLPTL ILFQGGKEVM RRPQIDKKGR 240
  241 AVSWTFSEEN VIREFNLNEL YQRAKKLSKA GDNIPEEQPV APTPTEVPDG ESKKDK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.47
Transmembrane Helix	21	39	0.55
Non-Cytoplasmic	40	296	0.73