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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73986046
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWCHLNLAL LVSGLGPGLQ AAKKTSLPPD EGTQDSTAAA SANIDKGLHM QKVGSGLVRA  60
   61 ALAELVALPC LFTLRSWPGA AREAPRIKWT KVRTASGQRQ DLPILVAKDN VVRVAKGWQG 120
  121 RVSLPAYPRH RANATLLLGP LRASDSGLYR CQVVRGIEDE QDLVPLEVTG VVFHYRAAQD 180
  181 RYALTFAEAQ EACRLSSATI AAPRHLQAAF EDGFDNCDAG WLSDRTVRYP ITQSRPGCYG 240
  241 DRSSLPGVRS YGRRDPRELY DVYCFARELG GEVFYVGPAR RLTLAGARAQ CRRQGAALAS 300
  301 VGQLHLAWHE GLDQCDPGWL ADGSVRYPIQ TPRRRCGGPA PGVRTVYRFA NRTGFPAPGA 360
  361 RFDAYCFRAH HPTPHQHGDP ETPSSGDEGE ILSAEGPPAQ ELEPSIGEEM VTPDFQEPLV 420
  421 SSGEEEPLIL AEKQQSRETP SPAPGGFTLA SRPSLEAEEA WLSPATPSPS SLSTAVGTHT 480
  481 EATPTGPIPR KRGRFKGLNG RHFQQQEPQQ GLEMGLEAGT QPPTPEAPGN HVEPLLATGA 540
  541 TDASGTSRSQ SPWAVLTNEV DMPEAGSPGG RSPPESWLWP PTVVPPSIPG PSRVLGLELE 600
  601 EAKGPSVRPA TPDLPWSPSE GTALAPSPSE GPSSASWEVA PMVSSPDLPV MAMLRAPKLW 660
  661 LQPHPTPLPT QADRVKGHSE AIATISPSPA SDTEVHSLSL SSVPTGQGRE ATGPSPDSPR 720
  721 ADFGETGGTS PTGLSKAELP RSTPQASVDR NVEDFAPTET AIEPPGVRDI SRSDSQATMD 780
  781 EAQGTWPSLH SEGLDSLPTS APSGVPRVFL IPGVTPSLEP WAAINGEAML GPTDSTANLD 840
  841 PSDAGRIWEP GSHVVEGAES PPTLSPQMAV NSSMAMSLSS PDPGDKVGVL AVSTMTSSSS 900
  901 QPHPGPEGQV VTQGTLGDLA PSHEGSPPGE PGFPPWTPKA AGMDKPVSVS SGEPTMPGDT 960
  961 PSTHPPASLD PEEFELEVLA GSPDVEGFWE ETASGEEPTL PGIPGNRSAE EAPLDPCENN1020
 1021 PCLHGGTCKA NGTMYGCSCD QGFTGENCEI DIDDCVSSPC ENGGTCIDEV NTFVCLCLPS1080
 1081 YGGSLCEKDT EGCDHGWHKF QGHCYRYFAH RRAWEDAERD CRRRAGHLTS IHSPEEHSFI1140
 1141 NSFGRENTWI GLNDRIVERD FQWTDNTGLQ YENWRENQPD NFFAGGEDCV VMVAHESGRW1200
 1201 NDVPCNYNLP YVCKKGTVLC GPPPAVQNAS PIGARKTKYN VHATVRYQCD EGFTQHHVAI1260
 1261 IRCRSNGKWD QPQIVCTKPR RSHRMRRHHH HHQHHHQHHH HKSRKERRKH KKHPVEDWEK1320
 1321 EEGNFC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle