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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57102910
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRHAVSPGQ GHPRSGREPE SDRSRGSPRL RLLWVGLALA LPHALVLWAP AGAHPLPPQS  60
   61 HLARFGRLVP QLRNTFGWWN LTCPVCKGLF TAIDFGLKKE PSVAWVGSMA TKICNVLKIA 120
  121 PPTVCQSAVQ LFEGDMVEVW TRSVLRPSEA CGLLLGSTCG HWDIFSSWNI SLPAVPKPSP 180
  181 QPPKPPAPGA PVSRILFLTD LHWDHDYLEG TDPNCENPLC CRRDSGLPPA SRPGAGYWGE 240
  241 YSKCDLPLRT LESLLSGLGP AGPFDMVYWT GDIPAHNVWH QSRQDQLRAL TTVTALVKKF 300
  301 LGPVPVYPAV GNHETTPVNG FPPPFIEGNF SSRWLYEAMA KAWESWLPDE ALHTLRIGGF 360
  361 YALSPRPGLR LISLNMNFCS RENFWLLINS TDPAGQLQWL VGELQAAEDR GDKVHIIGHI 420
  421 PPGHCLKSWS WNYYRIVARY ENTLAGQFFG HTHVDEFEVF YDEETLSRPL SVAFLAPSAT 480
  481 TYIGLNPGYR VYEIDGNYPG SSHVVLDHET YILNLTQANE PGAVPRWQRL YRARETYGLP 540
  541 NALPAAWHDL VYRMRGDTQL FQTFWFLYHK GHPPSEPCGM PCRLTILCAQ LSARSDSPAL 600
  601 CRHLVPDGSF PDDQSLQPRP PLC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle