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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73993482
Protein type: Globular with Signal Peptide
Type Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSCRDTGVL LCALLGGLLL TGSSSGSKLK GPELSLKGTQ HVMQAGQTLY LKCRGEAAHS  60
   61 WSLPETVRKE SKRLSITKSA CGRNGKQFCS TLTLNMAQAN HTGFYSCKYL SIPASKKKKT 120
  121 ESTIYIFIND TGRPFLEMHS EIPEIIYMTE GRQIVIPCRV TSPNITVTLK KFPLDTLIPD 180
  181 GKRITWDSRK GFIIANATYR EIGLLTCETT VNGHLYKTNY LTYRQTNTIR DVQINTPSPV 240
  241 KLLRGHTLTL NCTATTALNT RVQMNWSYPG EKNKRASIRQ RIGQRSSHAN VFYSVLIIDK 300
  301 VQNKDKGLYT CHVKSGPSFK SVNTSVHIYD KAFITVKHRK EHVLETIAGK RSYRLSVKVK 360
  361 AFPSPEVLWL KDGFPVTEKS ARYLVHGYSL IIKDVAAEDA GDYMILLAIK QSSVFKNLTT 420
  421 TLIVNVKPQI YEKAVSSFPD PTLYPLGSRQ ILTCTIYGIP QPTVRWFWRP CNHNHSKARY 480
  481 DFCSSKEESL IVELDSNIGN RIESITQRTA IIEGKNKTAS TLVVADARIS GIYSCMASNK 540
  541 IGTVERNISF YVTDVPNGFH INLEKMPTEG EDLKLSCTVN KFLYRDITWI LLRTVKNRTM 600
  601 HHSISKQKMA TTKEYSITLN VTIKNVSLED SGTYACRARN IYTGEEILQK KEVTIRDQEA 660
  661 PHLLRNLSDH TVAISSSTTL DCPATGVPEP EITWFKNNHK IQQEPGIILG PGSSTLFIER 720
  721 VTEEDEGVYH CKATNQKGSV ESSAYLTVQG TSDKSNLELI TLTCTCVAAT LFWLLLTLFI 780
  781 RKLKRSSSEI KTDYLSIIMD PDEVPLDEQC ERLPYDASKW EFARERLKLG KSLGRGAFGK 840
  841 VVQASAFGIK KSPTCRTVAV KMLKEGATAS EYKALMTELK ILTHIGHHLN VVNLLGACTK 900
  901 QGGPLMVIVE YCKYGNLSNY LKSKRDLFFL NKDAALHMEP KKEKMEPDPE QDKKQRLDSV 960
  961 TSSESFASSG FQEDKSLSDV EEEEDSDDFY KQPITMEDLI SYSFQVARGM EFLSSRKCIH1020
 1021 RDLAARNILL SENNVVKICD FGLARDIYKN PDYVRKGDTR LPLKWMAPES IFDKIYSTKS1080
 1081 DVWSYGVLLW EIFSLGGSPY PGVQMDEDFC SRLKEGMRMR APEYATPEIY QIMLDCWHKD1140
 1141 PKERPRFAEL VEKLGDLLQA NVQQDGKDYI PLNAILTGNS GFTYSSPAFS DDFFKEDISA1200
 1201 PKFNSGSSDN VRYVNAFNFM SLERIKTFEE LSPNTTSIFD DYQVDSSTLL ASPLLKRFTW1260
 1261 AESKPKASLK IDLRVTSKSK ESGLSDLTRP FCHSRCGHIN RGRRRFTYDN SELEKKISCC1320
 1321 SPPPDYNSVV LYSTPPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle