YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73997881
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMPLHQISA IPTQDATSAR IYRSKTKEKE REEQNEKTLG HSMSHSSNIS KAGGSSLASA  60
   61 PASAFSRASV TPSNQDICRI CHCEGDEESP LITPCRCTGS LHFVHQTCLQ QWIKSSDTRC 120
  121 CELCKYEFIM EIKLKPLRKW EKLQMTASER RKIMCSVTFH VIAITCVVWS LYVLIDRTTE 180
  181 EIKHGQATGI LEWPFWTKLV VVAIGFTGGL LFMYVQCKVY IQLWKRLKAY NRVIYVQNCP 240
  241 ETSKKSIFEN SALTEPNFEN KDGHGICHSD TNSSCWTEPE DTGTEIVHV

Type	Start	End	Confidence
Cytoplasmic	1	152	0.99
Transmembrane Helix	153	175	0.90
Non-Cytoplasmic	176	194	0.96
Transmembrane Helix	195	217	0.90
Cytoplasmic	218	289	0.97