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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73998649
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLWFVVPSI KPQDWFCFLQ KAFLDYLNPH RHPLASPEDP AVKFHGKRAP APFLDTPPSG  60
   61 PPLFRAGLDI LREQVWELGP SPVPSPPPSP LRAFIRIQFP PACWEYKFRA HGQVNAPPPP 120
  121 PPPPPPPRAP RHSSAPVPRG APHSPAPPAP RGPARDFSAR GSAQKVTSFI TDSICIRNRM 180
  181 YMKNVSAARC KFLASLLVAA NFGDFGGDGD SRRSRVLARA RLSAPAKRGP DASSGKPAIG 240
  241 EERLQAGGGG PGCVCARVRG AESQGLLRAW LCLGAAGGVS AGASGRTAQA ARSLGYLSRS 300
  301 VLGGCAQISG RRRRHSNFAA PSSLSPALAA LPFASLFALR SCAPSPAFGP FLSADVGCGS 360
  361 FAPRWPARHL QLRFPPSARH SAPLRLPPAT TCPLLRSPLR RGGAGHGGVN QLGGVFVNGR 420
  421 PLPDVVRQRI VELAHQGVRP CDISRQLRVS HGCVSKILGR YYETGSIKPG VIGGSKPKVA 480
  481 TPKVVDKIAE YKRQNPTMFA WEIRDRLLAE GICDNDTVPS VSSINRIIRT KVQQPFHPTP 540
  541 DGAGTGVTAP GHTIVPSTAS PPVSSASNDP VGSYSINGIL GIPRSNGEKR KRDEDVSEGS 600
  601 VPNGDSQSGV DSLRKHLRAD TFTQQQLEAL DRVFERPSYP DVFQASEHIK SEQGNEYSLP 660
  661 ALTPGLDEVK SSLSASTNPE LGSNVSGTQT YPVVTGRDMA STTLPGYPPH VPPTGQGSYP 720
  721 TSTLAGMVPE AIVGPSASLM SNPGREFAEV ALICIPLYVM APPQCPPTGA CAWGALSLSS 780
  781 LLSAPAHS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle