YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73998994
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRPKRRAV GSAAPQPPGG LAVRAEEEEE DGVEDEDEDE EDSDEDEDED DESVDEEVNV  60
   61 EFEAYSISDK DHDGIKKLLQ QLFLKAPVNT AELTDLLIQQ NHIGSVIKQT DVSEDSDDDV 120
  121 DEDEIFGFIS LLNLTERKGT QCVEQIKELI LSSCEKNCGK SLVEQLDTLL NDNSKPVGFL 180
  181 LSERFINVPP QIALPMHQQL QKELAEAHKT NKPCGKCYFY LLISKTFVEA GKNSKKKGSN 240
  241 QEEKEELMFA NAEEEFFYEK AILKFSYSVQ EESDTRLGGR WSFDDVPMKP LRTVMLIPGD 300
  301 RMDEIMDRLK EHLSV

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	315	0.99