YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73999621
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	70	0.76
Transmembrane Helix	71	93	0.83
Non-Cytoplasmic	94	102	0.68
Transmembrane Helix	103	125	0.89
Cytoplasmic	126	133	0.63
Transmembrane Helix	134	157	0.90
Non-Cytoplasmic	158	189	0.72
Transmembrane Helix	190	210	0.62
Cytoplasmic	211	219	0.66
Transmembrane Helix	220	241	0.83
Non-Cytoplasmic	242	251	0.86
Transmembrane Helix	252	274	0.90
Cytoplasmic	275	320	0.92
Transmembrane Helix	321	341	0.80
Non-Cytoplasmic	342	352	0.69
Transmembrane Helix	353	374	0.82
Cytoplasmic	375	384	0.86
Transmembrane Helix	385	407	0.86
Non-Cytoplasmic	408	414	0.86
Transmembrane Helix	415	438	0.92
Cytoplasmic	439	507	0.94

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARRGPFPQ ARDIPSLQSR REESGSAGAS ERGLGDPRGR RTTAVQDDVN YKMHFRMINE  60
   61 QQVEDITIDF FYRPHTITLL SFTIVSLMYF AFTRDDSVPE DNIWRGILSV VFFFLIISVL 120
  121 AFPNGPFTRP HPALWRMVFG LSVLYFLFLV FLLFLNFDQV KSLMYWLDPN LRYATREADI 180
  181 MEYAVNCHVI TWERIISHFD IFAFGHFWGW AMKALLIRSY GLCWTISITW ELTELFFMHL 240
  241 LPNFAECWWD QVILDILLCN GGGIWLGMVV CRFLEMRTYH WASFKDIHTT TGKIKRAVLQ 300
  301 FTPASWTYVR WFDPKSSFQR VAGIYLFMII WQLTELNTFF LKHIFVFQAS HPLSWCRILF 360
  361 IGGITAPTVR QYYAYLTDTQ CKRVGTQCWV FGVIGFLEAI VCIKFGQDLF SKTQILYVVL 420
  421 WLLCVAFTTF LCLYGMVWYA EHYGHREKTY SECDDGTYGP EISWSHAKGS KGSEDSPPKH 480
  481 PGNHESHSSR RRNRHSKSKV TNGLGKK