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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74002027
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLEHGICG GLVRGEDLEL ICAAMVEGLQ SLGNDFSLAV VSQPATCPIS TLSIPSDKKR  60
   61 MVREFLSPSG RYFQTGASTQ IKHQRGRTPH IPISEAASSR SRFPPGEGRR HVWRRWPSVA 120
  121 PAAPGAAPGT PATSVPRRVG RGGCEREAGR MLAGRTLARS PGSRPVPGLW PPLLPLLLLP 180
  181 LLRAPGGPVS AQEQPSCRGA FDLYFVLDKS GSVANNWIEI YNFVQQLTER FVSPQMRLSF 240
  241 IVFSSQATII LPLTGDRSKI SKGLEDLKNV SPVGETYIHE GLKLANEQIQ KAGGLKTSSI 300
  301 IIALTDGKLD GLVPSYAEKE AKISRSFGAR VYCVGVLDFE QAQLERIADS KEQVFPVKGG 360
  361 FQALKGIINS ILAQSCTEIL ELRPSSVCVG DEFQIVLTGR GFNLGSRNGS VLCTYTVNET 420
  421 YTKSVNPVSV ELNSMLCPAP ALSKVGETLD VSVSFNGGKS VISSSLIVTA TECSSGTAAI 480
  481 IAILVLLLLL GIGLMWWFWP LCCKVVIKDP PPPPPPAPKQ EEEEPLPTKK WPTVDASYYG 540
  541 GRGVGGIKRM EVRWGDKGST EEGARLEKAK NAVVKIPEEV EEPVRPRPPR PKPTYQPPQT 600
  601 KWYTPIKGRL DALWALLRRQ YDRVSLMRPQ EGDEGRCINF SRVPSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle