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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74008970
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARFGMPALL CTLAVLCAAL LAAEPKSKSC SEVRRLYVSK GFNKNDAPTH EINGDHLKIC  60
   61 PQGYTCCSQE MEEKYSLQSK DDFKSVVSEQ CNHLQAIFAS RYKKFDEFFK ELLENAEKSL 120
  121 NDMFVKTYGR LYMQNSELFK DLFGELKRYY VAGSVNLEEM LSDFWARLLE RMFRLVNSQY 180
  181 HFTDEYLECV SKYTEQLKPF GDVPRKLKLQ VTRAFVAART FAQGLAVARD VVSKVSVVNP 240
  241 TAQCTHALLK MIYCSHCQGL VNVKPCYNYC SNIMRGCLAN QGDLDFEWNN FIDAMLMVAE 300
  301 RLEGPFNIES VMDPIDVKIS DAIMNMQENS VQVSQKVFQG CGPPKPLPAG RISRSISEGA 360
  361 FSARFRPYHP EERPTTAAGT SLDRLVTDVK EKLKQAKKFW SSLPSNVCSD ERMAAGNGNE 420
  421 DDCWNGKGKS RYLFAVTGNG LANQGNNPEV QVDTSKPDIL ILRQIMALRV MTSKMKNAYN 480
  481 GNDVDFFDIS DESSGEGSGS GCEYQQCPSE FEYNVTDHSG KNANDKASSP GALVGAQPYL 540
  541 LAVFCILLLV MQREWR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle