YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71554603, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLYFSAFLL LILTACASGP RLDTSHPSVN FDGRVQYVIM HYTSTSMEKS LQLLTHGEVS  60
   61 SHYLIGDDSK ATIYKLVDES ARAWHAGESE WEGRTWLNSS SIGIEIVNPG FKDTPAGRLW 120
  121 YPYTEAQIQS ITVLLKDIVK RNKIDPKHII GHSDIAPTRK QDPGPLFPWK RLAAEGLGIW 180
  181 PDERLVAQHQ ALLATNLPSI SWFQQQLARL GYSTPQTGEL DTATRQVLAA FQMHYRPARF 240
  241 DGEPDAQSAA ILQVLNRVN

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	259	0.99