YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DADA_PSE14
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLVLGSGV IGTTSAYYLA RAGFQVTVVD RQPAAAMETS FANAGQVSPG YASPWAAPGV  60
   61 PLKAIKWLLQ RHAPLAIKAT ADIDQYLWMA QMLRNCTASR YTVNKERMVR LSEYSRDCLD 120
  121 ELRLETGIAY EGRSLGTTQL FRTQAQLDNA AKDIAVLEQS GVPYELLDRD GIARVEPALA 180
  181 GVTGILSGAL RLPNDQTGDC QLFTTRLAEM AVELGVEFRY GQNIERLDHA GDRINGVWID 240
  241 GKLETADRYV LALGSYSPQL LKPLGIKAPV YPLKGYSLTV PITNPAMAPT STILDETYKV 300
  301 AITRFDNRIR VGGMAEIAGF DLSLNPRRRE TLEMIVGDLY PQGGDLTQAS FWTGLRPTTP 360
  361 DGTPIVGATP FRNLFLNTGH GTLGWTMACG SGRLLADLIA RKTPRISAEG LDISRYGNTQ 420
  421 ENAQHVNPAP AHQ

Type	Start	End	Confidence
Signal Peptide	1	16	0.91
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	433	0.98