YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71556772, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVKPQRKHG PKAEMNVVPY IDVMLVLLVI FMVTAPMLTQ GVKIELPKVA SEALATDTRQ  60
   61 RIVTLSVKAQ GGYYWNLGDT VDTQTQTNQA ASLEDMQERI ARLVAERKDT QVFIRADDKA 120
  121 DYGRVVAAMA ALQRSGVTQL GLVTEAPQ

Type	Start	End	Confidence
Cytoplasmic	1	16	0.84
Transmembrane Helix	17	38	0.88
Non-Cytoplasmic	39	148	0.89