YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75910352, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNFLFQRII TYWQKLFIFK FANQSRSISI VPIKFTGTFI TGLCLSLLFA ACTANNASNI  60
   61 TTVSANNSTQ SKASVVRIGY QKSAILLKSK GLLEKRLQPE GVSVEWNEFP AGPQLLEAMN 120
  121 VGSIDFGHTG ESPPIFAQAA DAAITYIAGI IPSPANSAIL VPKNSDIKTV NDLKGKKIAF 180
  181 QKGSSAHYLL VQILEKNGLK YSDIQPIYLP PADARAAFVK GSIDAWSIWD PFYAAAEKSA 240
  241 DARVLIDGTG INKQGGYYLA SRKFANQQPE IIKAILEEIQ NTEQWSDKNR NEVAATLSPI 300
  301 LGIDLETMQR STNRRKFGIR PITPELITLQ QEVADKFYEL KLIPKAIDVK EAMLTPAQYA 360
  361 AFAPKNP

Type	Start	End	Confidence
Signal Peptide	1	54	0.78
N-region	1	45
H-region	46	51
C-region	52	54
Cleavage Site	54	55
Non-Cytoplasmic	55	367	0.99