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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76808719, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTKCRARAN GRAACASSSR PCCRAACIAP ARPKTNRASR GTARARWYDW PHSRGRLLDS  60
   61 TAPFFESWAC GARAGLPAES RRATQVPNRF TLFTTDTAVR LSSIKLAGFK SFVDPTHFQV 120
  121 PGQLVGVVGP NGCGKSNIID AVRWVLGESR ASELRGESMQ DVIFNGSTTR KPGSRASVEL 180
  181 IFDNSDGRAA GQWGQYGEIA VKRVLTRDGT SSYYINNLPA RRRDIQDIFL GTGLGPRAYA 240
  241 IIGQGMIARI IEAKPEELRV FLEEAAGVSK YKERRRETEN RLHDTRENLT RVEDIVRELG 300
  301 ANLEKLEAQA VVATKYKELV ADGEEKQRLL WLLRKNEAAA EQDRQRRAIG DAQIELDAQT 360
  361 AKLREVEAQL ETLRVAHYSA SDAMQGAQGA LYEANAEVSR LEAQIKFIVE SRNRVQAQIA 420
  421 ALVAQQEQWR AQADKAQGDL EVAEEARAVA DEKAAIAEDD AAAKHDALPA LEARWRDAQT 480
  481 GLNDERGRIA QTEQALKLEA AHQRNADQQL QQLQQRHERL KVEAGGLDAP DEAQLEELRM 540
  541 QLAEHEAMLA EAQARLADAQ EALPRLDAQR RAAHERVQAE SAQIHQLEAR LAALKQLQEN 600
  601 VQTQGKIQPW LDKHELGALP RLWKKLHVEA GWETALEAVL RERLAALEVS NLDWVKAFAT 660
  661 DAPPAKLAFY APPAAGEPLA APGALRPLLP LVRIDDAGLR AVLNDWLGTV FVADDLAQAL 720
  721 AARMQLPQGG AFVVKAGHVV TRSGVQLYAA DSEQAGMLAR AQEIENLTRQ VRAQALLSDE 780
  781 AKAAAIRAEA AHTQASQALT EVRAQAERAT QRVHALQMDV LKLTQAHERY TQRSTQIREE 840
  841 LEEIGAQIEE QRALRAESEA NFERHDAELA ELQARFEDNQ LAFESLDETL TNARQEARER 900
  901 ERAATDARFA ARQSANRIDE LKRSIQVAHE QAERVAASLE DARAELETIN EQTAHTGLQD 960
  961 ALEVRAAKEQ ALGAARAELD DLTAKLRAAD EARLAAERSL QPLRDRITEL QLKEQAARMT1020
 1021 GEQFAEQLAT AEVDEAALKE KLMPDMKPSY LQGEVTRINN AINALGPVNM AALDELAAAS1080
 1081 ERKVFLDAQS ADLTNAIETL EDAIRKIDQE TRALLQATFD EVNRHFSDLF PRLFGGGQAK1140
 1141 LIMTGDEILD AGVQVMAQPP GKKNATIHLL SGGEKALTAT ALVFAMFQLN PAPFCLLDEV1200
 1201 DAPLDDANTE RFANLVRAMS DKTQFLFISH NKIAMEMAQQ LIGVTMQEQG VSRIVAVDME1260
 1261 TAAGFAQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle