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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76812109, gi|...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVLIVVLAD VRARGGHVAR DVLIERAAER DVDELAAAAH AEHRLARLDE LVQQFELVHV  60
   61 AHAIAGPFGT RVGRRVGLRR HVGAALQQQP VQMLRVVAQP DVARMQHPLM ADGRNHEHEH 120
  121 VARHHPVRDR FLEILQRLAA QPRRADFWME DARRHADAQR TLRDPLAGAI EEPPRARRDD 180
  181 PAEHRPRRVA LFQVRRRRGR GRAGRRRARR LEIGRCAEAR RRRAGFRARA GCSGTRRRCA 240
  241 RARRAGGCGG VRAGPGRHGG RLHARAAGGD AGRAGLGDRA ARRRARIADI LRGCDLRGER 300
  301 ADVNGRARGR FVCDGGRRGR LTGVFRRRRC RRRTGLIGPC GRVFAHDGSL ARRSRGESTR 360
  361 IHYASVHDRR QTDRISSILL QRCGEFTPMW ATVTRRRAPF GMRSEARGAQ QQRSAAARQR 420
  421 APRGRLRRRD TSTPRPRAIP YRCARRANGR ARNDSRMRYR TRTAVKRVPV AIDRPRAPSL 480
  481 PAPTSARAAV RRRRRVACEA PARAAAPPRR NAVLQCANRP PSAIARLREA PNRADPLRQP 540
  541 DRTRYRHDHF RPLPAARPPR RRSRRRRDDE PRARRSRART DRRSGGARRA RVHRGRRAAR 600
  601 ARGRRRARSP ARGGHRAVTA RGHSGVGEGS VRRRGPGHAR GLPRARRRAP GRRRRRRGRP 660
  661 PQARGRRARR PHEHERIRVL RPGPQSALRH AALAVPARRA GRRADRGRLV VGRGRIGCGR 720
  721 HGGRRARDRY GRLDPHPRRT LRSDGLQADR EPDSEARRRA AVDDARFVRP DRRIGRVLRA 780
  781 RRPDPRGPRA ARVRRAPARG RAARRADELC DGRHGRARRH VARRRAQASG SGGRDRVGRA 840
  841 LRAARHAARH QPHRFRFDRG ACVASPARRA PPRRVRSARA RAHPEGRAGE RRRLPRSRRR 900
  901 ARGAHRRGGA HRVAALRCAR RADGAHRAAA HRRARTGRRR VRPHERARAA QPERVQFSRC 960
  961 VRAIAAVPSA RHGARRPDAR RRTASRRRAA RDRPGGRSGA RDDPLSAPTR APDAAPSKSG1020
 1021 ATFALKSDDS FSPTARRNPV SMNNLTLSLR RERRLLVLLA LVCLALLAGA LYLQYVKNED1080
 1081 PCPLCIIQRY FFVLIAVFAF IGAGMASGAG VAVTEALIVL SAAAGVGTAA RHLYVQLNPG1140
 1141 FSCGFDALQP VVDSLPPARW LPGVFKVAGL CETVYPPIFG ILLPGWALIA FVLIAVPVAV1200
 1201 SLLRHRGRLR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle