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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76611527
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTTATAEL GWIVHPPSGW EEVSGYDENM NTIRTYQVCN VFESSQNNWL RTKFIRRRGA  60
   61 HRIHVEMKFS VRDCSSIPSV PGSCKETFNL YYYEADFDSA TKTFPTWMEN PWVKVDTIAA 120
  121 DESFSQVDLG GRVMKINTEV RSFGPVSRSG FYLAFQDYGG CMSLIAVRVF YRKCPRIIQN 180
  181 GAVFQETLSG AESTSLVAAR GSCIANAEEV DVPIKLYCNG DGEWLVPIGR CMCKAGFEAV 240
  241 ENGTCQCCPS GTFKANQGDE ACTHCPINSR TTSEGATNCV CRNGYYRADL DPVDMPCTTI 300
  301 PSAPQAVISS VNETSLMLEW TPPRDSGGRE DLVYNIICKS CGSGRGACTR CGDNVQYAPR 360
  361 QLGLTEPRIY ISDLLAHTQY TFEIQAVNGV TDQSPFSPQF ASVNITTNQA APSAVSIMHQ 420
  421 VSRTVDSITL SWSQPDQPNG VILDYELQYY EKELSEYNAT AIKSPTNTVT VQGLKAGAIY 480
  481 VFQVRARTVA GYGRYSGKMY FQTMTEAEYQ TSIQEKLPLI IGSSAAGLVF LIAVVVIAIV 540
  541 CNRRGFERAD SEYTDKLQHY TSGHMTPGMK IYIDPFTYED PNEAVREFAK EIDISCVKIE 600
  601 QVIGAGEFGE VCSGHLKLPG KREIFVAIKT LKSGYTEKQR RDFLSEASIM GQFDHPNVIH 660
  661 LEGVVTKSTP VMIITEFMEN GSLDSFLRQN DGQFTVIQLV GMLRGIAAGM KYLADMNYVH 720
  721 RDLAARNILV NSNLVCKVSD FGLSRFLEDD TSDPTYTSAL GGKIPIRWTA PEAIQYRKFT 780
  781 SASDVWSYGI VMWEVMSYGE RPYWDMTNQD VINAIEQDYR LPPPMDCPSA LHQLMLDCWQ 840
  841 KDRNHRPKFG QIVNTLDKMI RNPNSLKAMA PLSSGINLPL LDRTIPDYTS FNTVDEWLEA 900
  901 IKMGQYKESF ANAGFTSFDV VSQMMMEDIL RVGVTLAGHQ KKILNSIQVM RAQMNQIQSV 960
  961 EV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle